Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937438.1_cds_XP_016482729.1_73923
CDS Infomation

[gene=LOC107803501] [db_xref=GeneID:107803501] [protein=ninja-family protein AFP3-like] [protein_id=XP_016482729.1] [location=complement(join(19685..20094,22567..23440))] [gbkey=CDS]
Sequence

ATGGAAGTGTTAAACATGCATGTACATGTGGAAATAGTTAAGTTTAAGAGGTTTAGTGTG
GTGTTGTTGATAATATATTTTGTGGGTAATTTATGGTTTGCCATGGGAGATAATACAGAT
GAGAAAAAGAAAAGTAGTAGAGTACTGGAAATGGAGAATTTTTCTATGGAAAGTAGTAGA
TTTTCAAGGGACTTATTGCAAAGATTTATGGGGAGTAGTAGTTCAAGAGCAAAGGATGAG
GATGAGGAAAATGATGAGGGAGAATTAGAGTTGAATCTTGGATTGTCATTAGGAGGTAGA
TTTGGTGTGGACAAATCTTGTAATAATAAGTTGATAAGGTCTAGTTCTGTAGCTGCTTGT
TTGCCAATAGTTAGAGATGATGATGCTTTAACACCATCACCCCCAGTTTCTTATCCAGCT
AGTTTAGTGAGAACATCTTCTTTACCTGTGGAGACTGAGGAAGAATGGAGGAAAAGGAAA
GAGTTGCAGACTTTGCGAAGAATGGAAGCTAAGAGGAGAAGATCAGAGAAGCAGAGGAAT
TTAAGGGGTGGTGATAAAGAAAGTGGTGGAGGATGTGTGGAAGATGAAAAGAGGGAAATT
GAGGTGAATTTGAAAGGTAAATTGGAGAAAGAACAGTACTTGGCGACCGCTAAAAAGTTT
GGTTTATCGGTATCTCCAACGTTAGCTGCAGTGGCTAGACAAGGTAGTTTGGGAGGAGGT
GGAATGGATTTGGCAATGGGAAAAGGTAAAGGAAGTTATTCTGGTAGTAAAAAGCAAGGA
CAAGGGCAATTGGGATCACAAGGTTCTGTGGAATCCCAAGGTGGCTGTGGTAGTTCTTCA
AGTATGTCTGAATTGGAAAGTAAACCTCCACAAGGGTCTGGCGAGCTAAGCCCTGCCAGT
ATCCACTCATTACAAGGAGGAGGGAGTCAAGACGTTGGTTCATCTGGGTCAAAAATGAGA
GAAATTGTAAACAGGCTGTCGGGAGGTGACATGGACAGTAGTCCATCTAAGAGACTCGGT
GCAGCAAAAAGTCAGGCAAAGGAAACGGGAGCAAACATGTTGGGAGATATGCCGTGCGTT
TTCACAAAAGGAGATGGTCCTAATGGTAGAAGAGTAGACGGAATATTATACAAGTACGGG
AAAGGGGAGGAGGTAAGAATTATGTACGTATGTCACGGTAGTTTTCACTCACCAGCCGAG
TTTGTCAAGCACGCTGGAGGTACCGATGTTGCTCACCCTCTCAAGCATATAGTTGTAAAC
CCCAATGCTTCTCCCCTCCTGTGA

Peptide Sequence

PEP ID

XP_016482729.1
PEP Infomation

PREDICTED: ninja-family protein AFP3-like [Nicotiana tabacum]
Sequence

MEVLNMHVHVEIVKFKRFSVVLLIIYFVGNLWFAMGDNTDEKKKSSRVLEMENFSMESSR
FSRDLLQRFMGSSSSRAKDEDEENDEGELELNLGLSLGGRFGVDKSCNNKLIRSSSVAAC
LPIVRDDDALTPSPPVSYPASLVRTSSLPVETEEEWRKRKELQTLRRMEAKRRRSEKQRN
LRGGDKESGGGCVEDEKREIEVNLKGKLEKEQYLATAKKFGLSVSPTLAAVARQGSLGGG
GMDLAMGKGKGSYSGSKKQGQGQLGSQGSVESQGGCGSSSSMSELESKPPQGSGELSPAS
IHSLQGGGSQDVGSSGSKMREIVNRLSGGDMDSSPSKRLGAAKSQAKETGANMLGDMPCV
FTKGDGPNGRRVDGILYKYGKGEEVRIMYVCHGSFHSPAEFVKHAGGTDVAHPLKHIVVN
PNASPLL

Transcript Sequence

Gene sequence data has not been registered.